ΔGC vs replicon size — regression statistics for taxa with ≥100 ERs

rank	taxon	N_total	n_neg	slope_neg	p_neg	interp_neg	n_pos	slope_pos	p_pos	interp_pos
phylum	Actinomycetota	1824	1603	0.035879	1.044014e-31	convergence toward chromosome	221	-0.095297	2.949176e-08	convergence toward chromosome
phylum	Bacillota	10464	9424	0.032820	2.363898e-36	convergence toward chromosome	1040	-0.033087	6.219014e-09	convergence toward chromosome
phylum	Bacteroidota	582	365	0.038221	4.739940e-04	convergence toward chromosome	217	-0.134285	5.508066e-06	convergence toward chromosome
phylum	Campylobacterota	488	437	-0.020769	1.155147e-01	no significant trend	51	-0.037212	4.991030e-02	convergence toward chromosome
phylum	Cyanobacteriota	486	320	0.070312	1.667945e-06	convergence toward chromosome	166	-0.145699	1.831561e-05	convergence toward chromosome
phylum	Deinococcota	219	185	0.069982	3.570142e-12	convergence toward chromosome	34	-0.310907	1.601882e-03	convergence toward chromosome
phylum	Pseudomonadota	38747	30308	0.061668	0.000000e+00	convergence toward chromosome	8439	-0.109651	2.337617e-162	convergence toward chromosome
phylum	Spirochaetota	1496	861	0.065159	6.055371e-31	convergence toward chromosome	635	-0.052391	7.829893e-17	convergence toward chromosome
class	Actinomycetes	1805	1587	0.035649	1.561159e-31	convergence toward chromosome	218	-0.097216	1.589847e-08	convergence toward chromosome
class	Alphaproteobacteria	4764	3423	0.132305	7.576535e-243	convergence toward chromosome	1341	-0.237647	2.704614e-101	convergence toward chromosome
class	Bacilli	9662	8751	0.030352	1.179852e-29	convergence toward chromosome	911	-0.033739	1.569218e-06	convergence toward chromosome
class	Bacteroidia	255	153	-0.002671	8.692223e-01	no significant trend	102	-0.164918	1.661813e-02	convergence toward chromosome
class	Betaproteobacteria	1940	1294	0.090089	5.337782e-43	convergence toward chromosome	646	-0.324664	4.509994e-43	convergence toward chromosome
class	Clostridia	776	650	0.077535	8.251791e-08	convergence toward chromosome	126	-0.037363	1.777783e-04	convergence toward chromosome
class	Cyanophyceae	486	320	0.070312	1.667945e-06	convergence toward chromosome	166	-0.145699	1.831561e-05	convergence toward chromosome
class	Cytophagia	212	133	0.072988	5.919536e-05	convergence toward chromosome	79	-0.076523	1.046919e-02	convergence toward chromosome
class	Deinococci	219	185	0.069982	3.570142e-12	convergence toward chromosome	34	-0.310907	1.601882e-03	convergence toward chromosome
class	Epsilonproteobacteria	488	437	-0.020769	1.155147e-01	no significant trend	51	-0.037212	4.991030e-02	convergence toward chromosome
class	Gammaproteobacteria	32022	25571	0.044419	0.000000e+00	convergence toward chromosome	6451	-0.052020	1.187471e-46	convergence toward chromosome
class	Spirochaetia	1496	861	0.065159	6.055371e-31	convergence toward chromosome	635	-0.052391	7.829893e-17	convergence toward chromosome
order	Acetobacterales	340	243	0.053332	1.604569e-06	convergence toward chromosome	97	-0.289831	1.085826e-11	convergence toward chromosome
order	Aeromonadales	352	324	-0.017860	1.179524e-01	no significant trend	28	-0.009915	9.267977e-01	no significant trend
order	Alteromonadales	191	162	0.249767	9.128770e-18	convergence toward chromosome	29	0.012266	7.675231e-01	no significant trend
order	Bacillales	4802	4421	0.012346	4.248140e-03	convergence toward chromosome	381	-0.053262	7.154582e-11	convergence toward chromosome
order	Bacteroidales	255	153	-0.002671	8.692223e-01	no significant trend	102	-0.164918	1.661813e-02	convergence toward chromosome
order	Burkholderiales	1636	1007	0.143954	7.863545e-126	convergence toward chromosome	629	-0.571394	1.849669e-56	convergence toward chromosome
order	Campylobacterales	480	429	-0.022092	1.019058e-01	no significant trend	51	-0.037212	4.991030e-02	convergence toward chromosome
order	Cytophagales	212	133	0.072988	5.919536e-05	convergence toward chromosome	79	-0.076523	1.046919e-02	convergence toward chromosome
order	Deinococcales	131	116	0.085863	3.735056e-18	convergence toward chromosome	15	-0.177175	2.400942e-01	no significant trend
order	Enterobacterales	26010	20690	0.034505	5.725938e-181	convergence toward chromosome	5320	-0.038516	9.585080e-25	convergence toward chromosome
order	Eubacteriales	573	521	0.094728	2.206092e-08	convergence toward chromosome	52	-0.036695	1.548698e-02	convergence toward chromosome
order	Hyphomicrobiales	2200	1693	0.183537	2.638111e-153	convergence toward chromosome	507	-0.160740	2.423214e-24	convergence toward chromosome
order	Kitasatosporales	714	609	0.038460	5.181134e-20	convergence toward chromosome	105	-0.068079	1.859372e-02	convergence toward chromosome
order	Lactobacillales	4860	4330	0.047685	1.147774e-46	convergence toward chromosome	530	0.015289	2.032382e-01	no significant trend
order	Leptospirales	221	122	0.133536	9.015213e-06	convergence toward chromosome	99	-0.133121	1.198389e-10	convergence toward chromosome
order	Lysobacterales	599	579	0.021953	4.301453e-05	convergence toward chromosome	20	-0.146701	8.466639e-02	no significant trend
order	Micrococcales	296	281	0.019657	3.000587e-03	convergence toward chromosome	15	-0.109731	2.107576e-02	convergence toward chromosome
order	Moraxellales	2366	1830	0.035270	4.185474e-11	convergence toward chromosome	536	-0.031501	5.959001e-03	convergence toward chromosome
order	Mycobacteriales	676	612	0.043530	8.030535e-10	convergence toward chromosome	64	-0.092735	9.931645e-04	convergence toward chromosome
order	Neisseriales	271	263	-0.022972	2.930690e-04	divergence away from chromosome	8	-0.018843	5.961690e-01	no significant trend
order	Nostocales	209	124	0.164017	2.142970e-07	convergence toward chromosome	85	-0.176497	3.258600e-04	convergence toward chromosome
order	Peptostreptococcales	171	104	0.029766	3.276838e-01	no significant trend	67	-0.036673	6.089651e-03	convergence toward chromosome
order	Pseudomonadales	727	688	0.006833	2.445821e-01	no significant trend	39	-0.149448	3.695865e-07	convergence toward chromosome
order	Rhodobacterales	1541	958	0.093092	7.301299e-62	convergence toward chromosome	583	-0.136349	1.235100e-25	convergence toward chromosome
order	Rhodospirillales	162	97	0.209758	4.845770e-18	convergence toward chromosome	65	-0.510104	8.128068e-05	convergence toward chromosome
order	Sphingomonadales	416	367	0.066560	1.153067e-08	convergence toward chromosome	49	-0.273543	4.669511e-02	convergence toward chromosome
order	Spirochaetales	1265	729	0.065563	5.268324e-29	convergence toward chromosome	536	-0.022064	1.209647e-04	convergence toward chromosome
order	Thiotrichales	371	302	0.190892	3.866589e-25	convergence toward chromosome	69	0.007010	3.638279e-01	no significant trend
order	Vibrionales	1159	834	0.269653	3.688166e-73	convergence toward chromosome	325	-0.202623	7.373295e-30	convergence toward chromosome
family	Acetobacteraceae	245	151	0.026048	4.173369e-02	convergence toward chromosome	94	-0.287243	1.089972e-10	convergence toward chromosome
family	Aeromonadaceae	351	323	-0.019125	9.331595e-02	no significant trend	28	-0.009915	9.267977e-01	no significant trend
family	Azospirillaceae	150	88	0.201246	3.335049e-15	convergence toward chromosome	62	-0.334580	6.826058e-03	convergence toward chromosome
family	Bacillaceae	2287	2045	0.030585	7.401962e-06	convergence toward chromosome	242	-0.052941	4.169530e-10	convergence toward chromosome
family	Bacteroidaceae	151	105	-0.083860	8.052952e-09	divergence away from chromosome	46	-0.028165	5.743193e-01	no significant trend
family	Borreliaceae	1252	716	0.073152	2.978711e-38	convergence toward chromosome	536	-0.022064	1.209647e-04	convergence toward chromosome
family	Brucellaceae	258	52	0.264119	1.186399e-08	convergence toward chromosome	206	-0.231117	2.276756e-62	convergence toward chromosome
family	Burkholderiaceae	1434	832	0.182412	1.278825e-148	convergence toward chromosome	602	-0.372886	5.367340e-31	convergence toward chromosome
family	Campylobacteraceae	334	289	-0.065972	5.518620e-05	divergence away from chromosome	45	-0.018750	3.496541e-01	no significant trend
family	Clostridiaceae	553	507	0.131805	3.100491e-11	convergence toward chromosome	46	-0.025539	5.551939e-02	no significant trend
family	Comamonadaceae	137	121	0.065444	2.238814e-07	convergence toward chromosome	16	-0.409732	1.733347e-02	convergence toward chromosome
family	Deinococcaceae	131	116	0.085863	3.735056e-18	convergence toward chromosome	15	-0.177175	2.400942e-01	no significant trend
family	Enterobacteriaceae	24207	19495	0.033127	6.503970e-157	convergence toward chromosome	4712	-0.097422	1.825651e-75	convergence toward chromosome
family	Enterococcaceae	2028	1884	0.014176	9.103316e-02	no significant trend	144	0.029737	2.496671e-01	no significant trend
family	Erwiniaceae	525	418	0.081758	1.206136e-12	convergence toward chromosome	107	-0.047455	3.512378e-04	convergence toward chromosome
family	Hafniaceae	173	163	0.063360	5.817927e-05	convergence toward chromosome	10	-0.150310	3.357133e-01	no significant trend
family	Helicobacteraceae	122	120	-0.083664	1.837033e-07	divergence away from chromosome	2	NaN	NaN	insufficient data
family	Lactobacillaceae	2210	1907	0.070428	1.114665e-82	convergence toward chromosome	303	-0.007157	4.954516e-01	no significant trend
family	Leptospiraceae	221	122	0.133536	9.015213e-06	convergence toward chromosome	99	-0.133121	1.198389e-10	convergence toward chromosome
family	Listeriaceae	120	118	-0.013121	5.217439e-01	no significant trend	2	NaN	NaN	insufficient data
family	Lysobacteraceae	592	572	0.017245	5.826250e-03	convergence toward chromosome	20	-0.146701	8.466639e-02	no significant trend
family	Methylobacteriaceae	115	113	0.097859	1.847915e-09	convergence toward chromosome	2	NaN	NaN	insufficient data
family	Microbacteriaceae	129	127	0.009779	1.586777e-01	no significant trend	2	NaN	NaN	insufficient data
family	Micrococcaceae	140	128	0.065501	4.688134e-04	convergence toward chromosome	12	-0.196272	3.355565e-02	convergence toward chromosome
family	Moraxellaceae	2366	1830	0.035270	4.185474e-11	convergence toward chromosome	536	-0.031501	5.959001e-03	convergence toward chromosome
family	Morganellaceae	533	171	0.054083	1.735024e-05	convergence toward chromosome	362	0.013885	4.271468e-02	divergence away from chromosome
family	Mycobacteriaceae	247	218	0.033551	2.219878e-01	no significant trend	29	-0.116242	4.716779e-03	convergence toward chromosome
family	Neisseriaceae	255	254	-0.022691	3.142744e-04	divergence away from chromosome	1	NaN	NaN	insufficient data
family	Nitrobacteraceae	121	118	-0.039796	2.421809e-01	no significant trend	3	NaN	NaN	insufficient data
family	Nocardiaceae	314	295	0.016748	4.148148e-01	no significant trend	19	-0.158819	5.287765e-03	convergence toward chromosome
family	Nostocaceae	156	99	0.144235	2.547371e-03	convergence toward chromosome	57	-0.218689	7.792006e-04	convergence toward chromosome
family	Paenibacillaceae	107	95	-0.067200	3.774461e-04	divergence away from chromosome	12	-0.399825	5.248000e-02	no significant trend
family	Paracoccaceae	418	269	0.095802	2.702494e-24	convergence toward chromosome	149	-0.233864	2.476626e-05	convergence toward chromosome
family	Peptostreptococcaceae	166	100	0.031484	4.002842e-01	no significant trend	66	-0.031192	9.738445e-03	convergence toward chromosome
family	Phyllobacteriaceae	125	107	0.137620	5.743713e-07	convergence toward chromosome	18	-0.159176	2.894596e-01	no significant trend
family	Piscirickettsiaceae	336	272	0.181580	2.702558e-18	convergence toward chromosome	64	0.004884	4.953030e-01	no significant trend
family	Pseudomonadaceae	708	671	0.006186	2.943781e-01	no significant trend	37	-0.153089	4.948214e-07	convergence toward chromosome
family	Rhizobiaceae	1381	1130	0.166169	2.061031e-79	convergence toward chromosome	251	-0.098690	1.181279e-09	convergence toward chromosome
family	Roseobacteraceae	1123	689	0.093469	1.434831e-32	convergence toward chromosome	434	-0.073486	1.183100e-11	convergence toward chromosome
family	Sphingomonadaceae	331	289	0.083304	2.496528e-06	convergence toward chromosome	42	-0.384214	2.354934e-02	convergence toward chromosome
family	Staphylococcaceae	2172	2059	-0.011409	7.301871e-02	no significant trend	113	-0.044350	3.945481e-02	convergence toward chromosome
family	Streptococcaceae	589	507	0.063780	4.525238e-08	convergence toward chromosome	82	-0.060664	1.542129e-02	convergence toward chromosome
family	Streptomycetaceae	714	609	0.038460	5.181134e-20	convergence toward chromosome	105	-0.068079	1.859372e-02	convergence toward chromosome
family	Vibrionaceae	1159	834	0.269653	3.688166e-73	convergence toward chromosome	325	-0.202623	7.373295e-30	convergence toward chromosome
family	Yersiniaceae	547	423	0.029553	1.238677e-06	convergence toward chromosome	124	-0.065684	3.447904e-02	convergence toward chromosome
genus	Acetobacter	104	27	0.001307	9.740149e-01	no significant trend	77	-0.280501	9.848071e-10	convergence toward chromosome
genus	Acinetobacter	2204	1673	0.032680	4.056355e-09	convergence toward chromosome	531	-0.031324	6.518214e-03	convergence toward chromosome
genus	Aeromonas	343	316	-0.019930	8.205967e-02	no significant trend	27	0.003601	9.733109e-01	no significant trend
genus	Arsenophonus	110	30	0.090533	4.977849e-02	convergence toward chromosome	80	0.022826	3.549351e-01	no significant trend
genus	Azospirillum	125	66	0.192728	2.972280e-10	convergence toward chromosome	59	-0.339665	6.639727e-03	convergence toward chromosome
genus	Bacillus	1806	1588	0.040206	1.008756e-07	convergence toward chromosome	218	-0.049525	1.030917e-09	convergence toward chromosome
genus	Bacteroides	125	85	-0.084570	2.838308e-07	divergence away from chromosome	40	-0.048056	3.996036e-01	no significant trend
genus	Borrelia	592	274	0.104517	4.474411e-12	convergence toward chromosome	318	-0.026648	1.711248e-02	convergence toward chromosome
genus	Borreliella	660	442	0.080358	4.352446e-40	convergence toward chromosome	218	-0.018166	1.703413e-04	convergence toward chromosome
genus	Bradyrhizobium	106	105	-0.159347	2.620587e-07	divergence away from chromosome	1	NaN	NaN	insufficient data
genus	Brucella/Ochrobactrum	245	42	0.491390	8.857817e-07	convergence toward chromosome	203	-0.381751	9.745111e-46	convergence toward chromosome
genus	Burkholderia	986	489	0.178854	5.630778e-121	convergence toward chromosome	497	-0.439122	3.585917e-30	convergence toward chromosome
genus	Campylobacter	334	289	-0.065972	5.518620e-05	divergence away from chromosome	45	-0.018750	3.496541e-01	no significant trend
genus	Citrobacter	972	605	0.054964	2.572732e-19	convergence toward chromosome	367	-0.096769	2.646483e-14	convergence toward chromosome
genus	Clostridioides	123	65	0.096530	2.488544e-02	convergence toward chromosome	58	-0.035973	6.193215e-03	convergence toward chromosome
genus	Clostridium	542	498	0.132721	6.904735e-11	convergence toward chromosome	44	-0.025308	6.369546e-02	no significant trend
genus	Deinococcus	131	116	0.085863	3.735056e-18	convergence toward chromosome	15	-0.177175	2.400942e-01	no significant trend
genus	Edwardsiella	156	153	0.074264	1.835017e-05	convergence toward chromosome	3	NaN	NaN	insufficient data
genus	Enterobacter	1566	1456	0.014282	1.803683e-03	convergence toward chromosome	110	0.025997	3.301190e-01	no significant trend
genus	Enterococcus	1975	1844	0.011701	1.740895e-01	no significant trend	131	0.029523	2.365375e-01	no significant trend
genus	Erwinia	130	115	0.015548	4.760697e-01	no significant trend	15	-0.065817	9.903866e-02	no significant trend
genus	Escherichia	9462	6148	0.056576	1.001698e-80	convergence toward chromosome	3314	-0.086344	8.770173e-34	convergence toward chromosome
genus	Helicobacter	122	120	-0.083664	1.837033e-07	divergence away from chromosome	2	NaN	NaN	insufficient data
genus	Klebsiella/Raoultella	9196	9056	0.046457	3.377090e-156	convergence toward chromosome	140	-0.064503	3.958885e-04	convergence toward chromosome
genus	Lacticaseibacillus	215	202	0.138669	1.753015e-19	convergence toward chromosome	13	-0.036356	3.492629e-02	convergence toward chromosome
genus	Lactiplantibacillus	909	895	0.104885	8.251495e-63	convergence toward chromosome	14	-0.009325	6.908259e-01	no significant trend
genus	Lactobacillus	132	95	0.032990	3.022383e-01	no significant trend	37	-0.019487	5.679068e-01	no significant trend
genus	Lactococcus	446	377	0.044150	3.754930e-03	convergence toward chromosome	69	-0.123115	3.266000e-02	convergence toward chromosome
genus	Leptospira	220	121	0.135260	4.913037e-06	convergence toward chromosome	99	-0.133121	1.198389e-10	convergence toward chromosome
genus	Leuconostoc	157	133	-0.008212	4.880221e-01	no significant trend	24	-0.031159	4.795215e-01	no significant trend
genus	Levilactobacillus	146	145	0.061402	6.390669e-10	convergence toward chromosome	1	NaN	NaN	insufficient data
genus	Listeria	118	116	-0.014578	4.858165e-01	no significant trend	2	NaN	NaN	insufficient data
genus	Moraxella	123	120	0.131824	2.092693e-13	convergence toward chromosome	3	NaN	NaN	insufficient data
genus	Mycobacterium	157	150	0.056343	1.072816e-01	no significant trend	7	-0.072225	4.028374e-01	no significant trend
genus	Neisseria	245	245	-0.021672	5.087957e-04	divergence away from chromosome	0	NaN	NaN	insufficient data
genus	Nostoc	135	84	0.143336	1.919564e-02	convergence toward chromosome	51	-0.320766	1.030863e-05	convergence toward chromosome
genus	Pantoea	290	271	0.116543	3.077057e-27	convergence toward chromosome	19	-0.273280	7.699680e-04	convergence toward chromosome
genus	Paraburkholderia	147	140	0.288788	4.051515e-22	convergence toward chromosome	7	-0.145847	5.337273e-01	no significant trend
genus	Paracoccus	203	133	0.093005	1.487680e-10	convergence toward chromosome	70	-0.458448	1.460374e-04	convergence toward chromosome
genus	Pediococcus	150	63	0.068294	2.601418e-03	convergence toward chromosome	87	0.022279	3.449394e-01	no significant trend
genus	Phaeobacter	292	158	0.162410	5.417963e-15	convergence toward chromosome	134	0.039316	3.732980e-02	divergence away from chromosome
genus	Photobacterium	101	91	0.217726	3.258673e-04	convergence toward chromosome	10	-0.221384	2.056466e-06	convergence toward chromosome
genus	Piscirickettsia	331	271	0.185282	6.915758e-19	convergence toward chromosome	60	0.002465	6.102902e-01	no significant trend
genus	Priestia	359	355	-0.068450	2.248204e-03	divergence away from chromosome	4	NaN	NaN	insufficient data
genus	Proteus	131	34	0.023521	3.892325e-01	no significant trend	97	0.048463	1.189244e-04	divergence away from chromosome
genus	Providencia	204	57	0.093177	6.124554e-03	convergence toward chromosome	147	-0.002215	8.234565e-01	no significant trend
genus	Pseudomonas	673	637	0.005449	3.741367e-01	no significant trend	36	-0.154703	5.517248e-07	convergence toward chromosome
genus	Pseudosulfitobacter	321	193	0.031624	4.267391e-02	convergence toward chromosome	128	-0.128031	1.582316e-20	convergence toward chromosome
genus	Ralstonia	101	48	0.274217	6.771762e-10	convergence toward chromosome	53	-0.122049	1.713213e-07	convergence toward chromosome
genus	Rhizobium/Agrobacterium	1052	828	0.158601	7.261184e-53	convergence toward chromosome	224	-0.380775	8.448318e-19	convergence toward chromosome
genus	Rhodococcus	272	255	0.016925	4.555993e-01	no significant trend	17	-0.151832	1.034448e-02	convergence toward chromosome
genus	Salmonella	2174	1618	0.026175	7.186794e-08	convergence toward chromosome	556	-0.140230	1.278363e-29	convergence toward chromosome
genus	Serratia	245	229	0.022338	3.803687e-03	convergence toward chromosome	16	-0.213572	1.453681e-02	convergence toward chromosome
genus	Shigella	597	402	0.016654	3.212035e-01	no significant trend	195	-0.115722	2.277016e-04	convergence toward chromosome
genus	Sinorhizobium/Ensifer	253	241	0.212486	3.277090e-29	convergence toward chromosome	12	-0.073858	2.225817e-15	convergence toward chromosome
genus	Sphingobium	176	151	0.085060	1.017401e-03	convergence toward chromosome	25	-0.334407	1.279823e-01	no significant trend
genus	Staphylococcus	2008	1903	-0.018745	1.181098e-02	divergence away from chromosome	105	-0.041792	6.755805e-02	no significant trend
genus	Streptococcus	143	130	0.021934	2.579792e-01	no significant trend	13	-0.025572	4.212516e-01	no significant trend
genus	Streptomyces	683	584	0.038132	2.110850e-17	convergence toward chromosome	99	-0.065536	1.945071e-02	convergence toward chromosome
genus	Sulfitobacter	168	137	0.071122	2.509296e-04	convergence toward chromosome	31	-0.371554	3.762604e-03	convergence toward chromosome
genus	Vibrio	1025	714	0.282634	3.060450e-69	convergence toward chromosome	311	-0.207764	1.226393e-23	convergence toward chromosome
genus	Xanthomonas	530	518	0.015676	3.006837e-02	convergence toward chromosome	12	-0.119353	1.638800e-01	no significant trend
genus	Yersinia	279	175	-0.024883	2.242174e-01	no significant trend	104	-0.000331	9.907652e-01	no significant trend